MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Mycobacterium tuberculosis H37Ra chromosome

Total Repeats: 8600

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S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
8501	NC_009525	TCC	2	6	4346990	4346995	0 %	33.33 %	0 %	66.67 %	Non-Coding
8502	NC_009525	CTGC	2	8	4346997	4347004	0 %	25 %	25 %	50 %	Non-Coding
8503	NC_009525	TGC	2	6	4347012	4347017	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
8504	NC_009525	GC	3	6	4347049	4347054	0 %	0 %	50 %	50 %	Non-Coding
8505	NC_009525	CCG	2	6	4347056	4347061	0 %	0 %	33.33 %	66.67 %	Non-Coding
8506	NC_009525	GTGAA	2	10	4347176	4347185	40 %	20 %	40 %	0 %	Non-Coding
8507	NC_009525	CGTCG	2	10	4347233	4347242	0 %	20 %	40 %	40 %	Non-Coding
8508	NC_009525	CG	4	8	4348539	4348546	0 %	0 %	50 %	50 %	Non-Coding
8509	NC_009525	A	6	6	4348607	4348612	100 %	0 %	0 %	0 %	Non-Coding
8510	NC_009525	C	6	6	4348625	4348630	0 %	0 %	0 %	100 %	Non-Coding
8511	NC_009525	GCT	2	6	4348638	4348643	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
8512	NC_009525	ATG	2	6	4348675	4348680	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
8513	NC_009525	CAG	2	6	4349941	4349946	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
8514	NC_009525	AGG	2	6	4349997	4350002	33.33 %	0 %	66.67 %	0 %	Non-Coding
8515	NC_009525	CGA	2	6	4357181	4357186	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
8516	NC_009525	GAG	3	9	4357203	4357211	33.33 %	0 %	66.67 %	0 %	Non-Coding
8517	NC_009525	CGA	2	6	4357234	4357239	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
8518	NC_009525	GAG	3	9	4357256	4357264	33.33 %	0 %	66.67 %	0 %	Non-Coding
8519	NC_009525	GC	3	6	4357267	4357272	0 %	0 %	50 %	50 %	Non-Coding
8520	NC_009525	ATT	2	6	4359050	4359055	33.33 %	66.67 %	0 %	0 %	Non-Coding
8521	NC_009525	GTTT	2	8	4359122	4359129	0 %	75 %	25 %	0 %	Non-Coding
8522	NC_009525	AGGG	2	8	4359170	4359177	25 %	0 %	75 %	0 %	Non-Coding
8523	NC_009525	AAG	2	6	4359178	4359183	66.67 %	0 %	33.33 %	0 %	Non-Coding
8524	NC_009525	GGAG	2	8	4359505	4359512	25 %	0 %	75 %	0 %	Non-Coding
8525	NC_009525	ACA	2	6	4360640	4360645	66.67 %	0 %	0 %	33.33 %	Non-Coding
8526	NC_009525	AG	3	6	4360701	4360706	50 %	0 %	50 %	0 %	Non-Coding
8527	NC_009525	AGT	2	6	4360709	4360714	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
8528	NC_009525	TGC	2	6	4365069	4365074	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
8529	NC_009525	CGCA	2	8	4366007	4366014	25 %	0 %	25 %	50 %	Non-Coding
8530	NC_009525	CG	3	6	4368355	4368360	0 %	0 %	50 %	50 %	Non-Coding
8531	NC_009525	ATG	2	6	4368362	4368367	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
8532	NC_009525	GGT	2	6	4368389	4368394	0 %	33.33 %	66.67 %	0 %	Non-Coding
8533	NC_009525	GGT	2	6	4368435	4368440	0 %	33.33 %	66.67 %	0 %	Non-Coding
8534	NC_009525	AGCT	2	8	4368482	4368489	25 %	25 %	25 %	25 %	Non-Coding
8535	NC_009525	GC	3	6	4368580	4368585	0 %	0 %	50 %	50 %	Non-Coding
8536	NC_009525	GCG	2	6	4368600	4368605	0 %	0 %	66.67 %	33.33 %	Non-Coding
8537	NC_009525	ACC	2	6	4368627	4368632	33.33 %	0 %	0 %	66.67 %	Non-Coding
8538	NC_009525	CAA	2	6	4368634	4368639	66.67 %	0 %	0 %	33.33 %	Non-Coding
8539	NC_009525	ATC	2	6	4370377	4370382	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
8540	NC_009525	TCG	2	6	4370405	4370410	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
8541	NC_009525	GCC	2	6	4370442	4370447	0 %	0 %	33.33 %	66.67 %	Non-Coding
8542	NC_009525	TG	3	6	4373280	4373285	0 %	50 %	50 %	0 %	Non-Coding
8543	NC_009525	AAC	2	6	4373310	4373315	66.67 %	0 %	0 %	33.33 %	Non-Coding
8544	NC_009525	CCG	2	6	4373336	4373341	0 %	0 %	33.33 %	66.67 %	Non-Coding
8545	NC_009525	CGC	3	9	4375285	4375293	0 %	0 %	33.33 %	66.67 %	Non-Coding
8546	NC_009525	GT	3	6	4375312	4375317	0 %	50 %	50 %	0 %	Non-Coding
8547	NC_009525	AGC	2	6	4382099	4382104	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
8548	NC_009525	CG	3	6	4382124	4382129	0 %	0 %	50 %	50 %	Non-Coding
8549	NC_009525	CGGC	2	8	4382163	4382170	0 %	0 %	50 %	50 %	Non-Coding
8550	NC_009525	GCT	2	6	4382886	4382891	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
8551	NC_009525	GCC	2	6	4384155	4384160	0 %	0 %	33.33 %	66.67 %	Non-Coding
8552	NC_009525	GC	4	8	4384161	4384168	0 %	0 %	50 %	50 %	Non-Coding
8553	NC_009525	GTC	2	6	4384523	4384528	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
8554	NC_009525	CGC	2	6	4384558	4384563	0 %	0 %	33.33 %	66.67 %	Non-Coding
8555	NC_009525	GGA	2	6	4384623	4384628	33.33 %	0 %	66.67 %	0 %	Non-Coding
8556	NC_009525	CG	3	6	4384631	4384636	0 %	0 %	50 %	50 %	Non-Coding
8557	NC_009525	GC	3	6	4384685	4384690	0 %	0 %	50 %	50 %	Non-Coding
8558	NC_009525	GACCA	2	10	4391332	4391341	40 %	0 %	20 %	40 %	Non-Coding
8559	NC_009525	ACT	2	6	4391404	4391409	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
8560	NC_009525	GCA	2	6	4392500	4392505	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
8561	NC_009525	CGC	2	6	4392520	4392525	0 %	0 %	33.33 %	66.67 %	Non-Coding
8562	NC_009525	AGC	2	6	4394768	4394773	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
8563	NC_009525	CGT	2	6	4394788	4394793	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
8564	NC_009525	CGC	2	6	4395282	4395287	0 %	0 %	33.33 %	66.67 %	Non-Coding
8565	NC_009525	CAC	2	6	4395358	4395363	33.33 %	0 %	0 %	66.67 %	Non-Coding
8566	NC_009525	AC	3	6	4395373	4395378	50 %	0 %	0 %	50 %	Non-Coding
8567	NC_009525	CTG	2	6	4395435	4395440	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
8568	NC_009525	GCC	2	6	4395566	4395571	0 %	0 %	33.33 %	66.67 %	Non-Coding
8569	NC_009525	ACA	2	6	4395597	4395602	66.67 %	0 %	0 %	33.33 %	Non-Coding
8570	NC_009525	CGC	2	6	4395617	4395622	0 %	0 %	33.33 %	66.67 %	Non-Coding
8571	NC_009525	GCT	2	6	4395711	4395716	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
8572	NC_009525	TATCT	2	10	4395747	4395756	20 %	60 %	0 %	20 %	Non-Coding
8573	NC_009525	GCC	2	6	4399517	4399522	0 %	0 %	33.33 %	66.67 %	Non-Coding
8574	NC_009525	CGC	2	6	4399533	4399538	0 %	0 %	33.33 %	66.67 %	Non-Coding
8575	NC_009525	CGGT	2	8	4401557	4401564	0 %	25 %	50 %	25 %	Non-Coding
8576	NC_009525	GGA	2	6	4401565	4401570	33.33 %	0 %	66.67 %	0 %	Non-Coding
8577	NC_009525	TCG	2	6	4401625	4401630	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
8578	NC_009525	CG	3	6	4401641	4401646	0 %	0 %	50 %	50 %	Non-Coding
8579	NC_009525	CGA	2	6	4401829	4401834	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
8580	NC_009525	CCCG	2	8	4401867	4401874	0 %	0 %	25 %	75 %	Non-Coding
8581	NC_009525	CTA	2	6	4401881	4401886	33.33 %	33.33 %	0 %	33.33 %	Non-Coding
8582	NC_009525	CCGGG	2	10	4408598	4408607	0 %	0 %	60 %	40 %	Non-Coding
8583	NC_009525	GCCA	2	8	4408612	4408619	25 %	0 %	25 %	50 %	Non-Coding
8584	NC_009525	CGT	2	6	4409237	4409242	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
8585	NC_009525	CGC	2	6	4409261	4409266	0 %	0 %	33.33 %	66.67 %	Non-Coding
8586	NC_009525	TCGC	2	8	4410095	4410102	0 %	25 %	25 %	50 %	Non-Coding
8587	NC_009525	CAG	2	6	4410112	4410117	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
8588	NC_009525	CGTT	2	8	4410130	4410137	0 %	50 %	25 %	25 %	Non-Coding
8589	NC_009525	AG	3	6	4413697	4413702	50 %	0 %	50 %	0 %	Non-Coding
8590	NC_009525	CCGG	2	8	4413763	4413770	0 %	0 %	50 %	50 %	Non-Coding
8591	NC_009525	CCG	2	6	4416656	4416661	0 %	0 %	33.33 %	66.67 %	Non-Coding
8592	NC_009525	GCG	2	6	4416748	4416753	0 %	0 %	66.67 %	33.33 %	Non-Coding
8593	NC_009525	TCGG	2	8	4416754	4416761	0 %	25 %	50 %	25 %	Non-Coding
8594	NC_009525	CACT	2	8	4419415	4419422	25 %	25 %	0 %	50 %	Non-Coding
8595	NC_009525	GGT	2	6	4419458	4419463	0 %	33.33 %	66.67 %	0 %	Non-Coding
8596	NC_009525	GCT	2	6	4419468	4419473	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
8597	NC_009525	GCT	2	6	4419612	4419617	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
8598	NC_009525	CAC	2	6	4419659	4419664	33.33 %	0 %	0 %	66.67 %	Non-Coding
8599	NC_009525	AAC	2	6	4419672	4419677	66.67 %	0 %	0 %	33.33 %	Non-Coding
8600	NC_009525	CAA	2	6	4419912	4419917	66.67 %	0 %	0 %	33.33 %	Non-Coding

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©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.